Hogenom_evoscen

1867

Service version1.0

Contributor URLhttp://prodom.prabi.fr/prodom/2006.1/documentation/hogenom_evoscen.html

WSDL URLhttp://prodom.prabi.fr/prodom/2006.1/wsdl/hogenom_evoscen.wsdl PASSED

Hogenom_evoscen is a set of webservices allowing to browse Hogenom 4 evolutionary scenarios. It includes

GetScenarioHogenom : takes an Hogenom family (HBG + 6 digits) and returns its evolutionary scenario as a string of (number of nodes) characters (absence = 1, presence = 2)
GetPresentFamiliesHogenom : takes a taxID present in Hogenom and returns a list of Hogenom families present at this node
GetInheritedFamiliesHogenom : takes a taxID present in Hogenom and returns a list of Hogenom families inherited at this node
GetInnovatedFamiliesHogenom : takes a taxID present in Hogenom and returns a list of Hogenom families innovated at this node
GetLostFamiliesHogenom : takes a taxID present in Hogenom and returns a list of Hogenom families lost at this node
GetRegainedFamiliesHogenom : takes a taxID present in Hogenom and returns a list of Hogenom families gained again at this node
GetTransferedFamiliesHogenom : takes a taxID present in Hogenom and returns a list of Hogenom families transfered (both directions) at this node

Please see ProDom help
page and Hogenom description if needed.
We have a perl script available here to run this webservice from your computer. Please install SOAP Lite before.

A description of the WSDL service:

Hogenom_evoscen

Namespace: http://prodom.prabi.fr/Hogenom_evoscen

Port: Hogenom_evoscenPort
Location: http://prodom.prabi.fr/prodom/2006.1/cgi-bin/hogenom_evoscen.pl
Protocol: http://schemas.xmlsoap.org/soap/http
Default Style: document

Operations

GetScenarioHogenom

Takes an Hogenom family and returns its evolutionary scenario as a string of 391 characters (1=absence, 2=presence) in DFS order

SOAP Action: http://prodom.prabi.fr/Hogenom_evoscen#GetScenarioHogenom
Input Message: GetScenarioHogenomMsg
- inputWrapper
  - GetScenarioHogenom type
    - HogenomFamily type string
Output Message: GetScenarioHogenomResponseMsg
- outputWrapper
  - GetScenarioHogenomResponse type
    - ScenarioText type string

GetPresentFamiliesHogenom

Takes an NCBI taxID present in Hogenom and returns the present Hogenom families at this node

SOAP Action: http://prodom.prabi.fr/Hogenom_evoscen#GetPresentFamiliesHogenom
Input Message: GetPresentFamiliesHogenomMsg
- inputWrapper
  - GetPresentFamiliesHogenom type
    - taxID type string
Output Message: GetPresentFamiliesHogenomResponseMsg
- outputWrapper
  - GetPresentFamiliesHogenomResponse type
    - FamiliesList type string

GetInheritedFamiliesHogenom

Takes an NCBI taxID present in Hogenom and returns the Hogenom families inherited at this node

SOAP Action: http://prodom.prabi.fr/Hogenom_evoscen#GetInheritedFamiliesHogenom
Input Message: GetInheritedFamiliesHogenomMsg
- inputWrapper
  - GetInheritedFamiliesHogenom type
    - taxID type string
Output Message: GetInheritedFamiliesHogenomResponseMsg
- outputWrapper
  - GetInheritedFamiliesHogenomResponse type
    - FamiliesList type string

GetInnovatedFamiliesHogenom

Takes an NCBI taxID present in Hogenom and returns the Hogenom families innovated at this node

SOAP Action: http://prodom.prabi.fr/Hogenom_evoscen#GetInnovatedFamiliesHogenom
Input Message: GetInnovatedFamiliesHogenomMsg
- inputWrapper
  - GetInnovatedFamiliesHogenom type
    - taxID type string
Output Message: GetInnovatedFamiliesHogenomResponseMsg
- outputWrapper
  - GetInnovatedFamiliesHogenomResponse type
    - FamiliesList type string

GetLostFamiliesHogenom

Takes an NCBI taxID present in Hogenom and returns the Hogenom families lost at this node

SOAP Action: http://prodom.prabi.fr/Hogenom_evoscen#GetLostFamiliesHogenom
Input Message: GetLostFamiliesHogenomMsg
- inputWrapper
  - GetLostFamiliesHogenom type
    - taxID type string
Output Message: GetLostFamiliesHogenomResponseMsg
- outputWrapper
  - GetLostFamiliesHogenomResponse type
    - FamiliesList type string

GetRegainedFamiliesHogenom

Takes an NCBI taxID present in Hogenom and returns the Hogenom families gained again at this node

SOAP Action: http://prodom.prabi.fr/Hogenom_evoscen#GetRegainedFamiliesHogenom
Input Message: GetRegainedFamiliesHogenomMsg
- inputWrapper
  - GetRegainedFamiliesHogenom type
    - taxID type string
Output Message: GetRegainedFamiliesHogenomResponseMsg
- outputWrapper
  - GetRegainedFamiliesHogenomResponse type
    - FamiliesList type string

GetTransferedFamiliesHogenom

Takes an NCBI taxID present in Hogenom and returns the Hogenom families transfered (both directions) at this node

SOAP Action: http://prodom.prabi.fr/Hogenom_evoscen#GetTransferedFamiliesHogenom
Input Message: GetTransferedFamiliesHogenomMsg
- inputWrapper
  - GetTransferedFamiliesHogenom type
    - taxID type string
Output Message: GetTransferedFamiliesHogenomResponseMsg
- outputWrapper
  - GetTransferedFamiliesHogenomResponse type
    - FamiliesList type string

WSDL Changes

Date	Description of Changes
11th May 2009	First Snapshot
3rd June 2009	Operation named GetInnovatedFamiliesHogenom - Input message part added.

Test #1: Hogenom_evoscenTest

This is a test for Hogenom_evoscen set of webservices. It uses perl and SOAPlite. It includes tests for the following webservices :

GetScenario : output must be of a given length (number of nodes)
GetPresentFamiliesHogenom : output must be 520 elements long (the query is taxID 160232)
GetInheritedFamiliesHogenom : output must be 251 elements long (the query is taxID 160232)
GetInnovatedFamiliesHogenom : output must be 258 elements long (the query is taxID 160232)

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